rs17596562 chr15:91966121 T>C
- Sequence
agcgaattatgggcagctctgatc[T/C]gaagtaacaaggttgagtcgagat
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) Mel270 (Uveal melanoma)
- ASB for transcription factors
- ESR1_HUMAN CREB1_HUMAN FOS_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.08 | 0.29 | 1.61 | n/a | No Hit | |||
| CREB1_HUMAN | 2.36 | -3.60 | 1.50 | n/a | No Hit | |||
| FOS_HUMAN | 1.82 | -1.60 | 1.00 | n/a | n/a | |||
| GATA3_HUMAN | 2.19 | -4.14 | 1.50 | n/a | No Hit | |||
| SMCA4_HUMAN | 0.36 | 1.69 | 1.90 | n/a | n/a |
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