rs17629195 chr5:154296942 C>T
- Sequence
agtagtcagagcccttgggctcca[C/T]gtctcagcttgcaccttcctggaa
- ASB in cell types
- breast tumor
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.33 | 0.49 | 1.77 | n/a | No Hit | |||
| ANDR_HUMAN | 1.58 | -0.03 | 1.68 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), fasting blood glucose, fasting insulin, height, homa-ir, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cortex, Brain_Hypothalamus, Esophagus_Mucosa, Heart_Atrial_Appendage, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg