rs17646897 chr8:9088866 C>A
- Sequence
caatgagtgtctctgcagaacagg[C/A]caaacacattccctgaccaggtca
- ASB in cell types
- A549 (lung carcinoma) HKC8 (kidney proximal tubule cell line) EA.hy 926 (human umbilical vein endothelial cell line) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN EPAS1_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.63 | 2.77 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 0.42 | 2.86 | 1.47 | n/a | n/a | |||
| EPAS1_HUMAN | 0.55 | 3.56 | 1.00 | n/a | No Hit | |||
| TCF21_HUMAN | 1.66 | n/a | 2.00 | n/a | n/a | |||
| HIF1A_HUMAN | n/a | 1.52 | 4.00 | n/a | No Hit |
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