rs17672051 chr5:170303182 T>C
- Sequence
cctgtgcaaggcaacgagaagcaa[T/C]attttccacttcctcccagttgac
- ASB in cell types
- fetal bone marrow-derived mononuclear cells K562 (myelogenous leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- KMT2A_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | 2.88 | 0.07 | 1.25 | n/a | n/a | |||
| TF65_HUMAN | n/a | 2.17 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, chronic kidney disease, fasting blood glucose