rs1776179 chr1:241848104 T>C
- Sequence
cggagagctcaggacgcaacccta[T/C]gagttggaagccgcaggaggcgga
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) adult erythroblasts HepG2 (hepatoblastoma)
- ASB for transcription factors
- TYY1_HUMAN GABPA_HUMAN ZNF18_HUMAN ZIC2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.35 | 1.36 | 4.00 | n/a | No Hit | |||
| GABPA_HUMAN | 1.50 | 0.30 | 2.10 | n/a | No Hit | |||
| ZNF18_HUMAN | n/a | 2.08 | 4.00 | n/a | No Hit | |||
| ZIC2_HUMAN | n/a | 3.05 | 3.00 | n/a | n/a | |||
| KLF11_HUMAN | 1.70 | -1.03 | 1.00 | n/a | n/a |
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