rs17770799 chr8:23490338 T>C

Sequence
cagggctccccattctgaagttta[T/C]ctttgtgctatctctaaaagaagg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.79 0.88 0.050.75 1.01
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Motif analysis

No data available

Genetic associations

GRASP decrease in fev1 (in asthmatic participants) decrease in fev1 (in nonasthmatic and asthmatic participants) decrease in fev1 (in nonasthmatic participants) ldl cholesterol total cholesterol
GTEx eQTL Artery_Aorta Esophagus_Mucosa Testis Thyroid Whole_Blood

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