rs17833590 chr14:59055615 C>T
- Sequence
gtaactacctccatcaattgagtt[C/T]atactgacatctggaggccaagcc
- ASB in cell types
- foreskin keratinocyte GM12890 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line) upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.58 | 0.68 | 1.28 | n/a | No Hit | |||
| RAD21_HUMAN | 0.51 | 1.25 | 1.15 | n/a | n/a |
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