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rs178733 chr7:128135297 T>A

Sequence
cgtggtgaaaaccctcctacctag[T/A]gcttcgccctcatcacgattatcc
ASB in cell types
HCT-116 (colon carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma) n/a 2.59 1.007.4·10-3 1.00
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg

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