rs179117 chr20:57941806 G>A

Sequence
tccctcctggagaggtgtcctggc[G/A]ggggcggccatgtggggtgaggtc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PAX2_HUMAN CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN 2.40 n/a 1.5·10-31.00 3.00 n/a n/a
CEBPB_HUMAN 1.47 -0.23 0.030.98 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

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