rs179158 chr14:95507273 C>T

Sequence
cactgggcagcgctgtgtctctgg[C/T]atcttcctagttcgtgtccacctc
ASB in cell types
CD14+ monocytes macrophages
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.60 -1.07 2.1·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP prop taste detection threshold,  refractive error,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Cells_EBV-transformed_lymphocytes,  Esophagus_Gastroesophageal_Junction,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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