rs179762 chr16:27426650 G>A
- Sequence
cactggtacagcacttcacagtcc[G/A]tgaagcactaccacatctgctttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocytes from periferal blood CD14+ monocytes
- ASB for transcription factors
- STAG1_HUMAN SRBP2_HUMAN FOXP1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.16 | 1.38 | 1.00 | n/a | n/a | |||
| SRBP2_HUMAN | n/a | 3.20 | 3.00 | n/a | No Hit | |||
| FOXP1_HUMAN | -1.04 | 1.91 | 1.50 | n/a | No Hit | |||
| IKZF1_HUMAN | 0.38 | 0.87 | 1.00 | n/a | No Hit |
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