rs180000 chr6:16316651 G>A
- Sequence
atctcagctactctgaaggctgaa[G/A]caggagaattgcttgaacctggga
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes GM10847 (female B-cells Lymphoblastoid Cell Lines) neural progenitors
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | n/a | 2.71 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.98 | 0.80 | 1.26 | n/a | No Hit |
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