rs180353 chr11:116733354 T>C

Sequence
tgaggtcatagaaatcagggaatt[T/C]ctatatgtctgtcattcagagaag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 1.16 0.15 1.2·10-31.00 1.02
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad) hdl cholesterol ldl cholesterol total cholesterol triglycerides
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellum Brain_Cortex Brain_Hippocampus Brain_Putamen_basal_ganglia Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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