rs180769054 chr20:49915556 G>A
- Sequence
tcggcccggaaatgatgtcaccat[G/A]aggcgggcccgaagagagggtgga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) primary B-CLL cells
- ASB for transcription factors
- GABPA_HUMAN BRD4_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 2.14 | n/a | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 1.87 | n/a | 3.00 | n/a | n/a | |||
| CREB1_HUMAN | 0.31 | 0.00 | 2.25 | n/a | No Hit |
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