rs180779912 chr16:76376 G>T
- Sequence
tgagaccacaaaccaggaagtggg[G/T]ggggggagtgcccagagattgcgc
- ASB in cell types
- SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- RUNX2_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX2_HUMAN | -2.66 | 1.72 | 1.50 | n/a | No Hit | |||
| FLI1_HUMAN | -2.29 | 1.42 | 1.50 | -2.30 | Discordant |
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Motif analysis
