rs1811196 chr17:43656768 T>C

Sequence
catgaggaaaccaccgcaaaatcc[T/C]tcattcccataaattaaagacaac
ASB for transcription factors
GLIS1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 2.48 n/a 0.051.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  hdl cholesterol,  triglycerides
GTEx eQTL Brain_Cerebellum,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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