ADASTRA v5.1.3
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rs1812214
chr8:104331842
A
>
G
Sequence
atgaatttaaggagagggcactgg[A/G]agaggctacaactcttgatgtcac
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
breast tumor xenograft
MDA-MB-231ERb(triple negative breast cancer)
ASB for transcription factors
ESR1_HUMAN
ESR2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
1.16
0.25
2.4·10
-5
1.00
1.97
n/a
No Hit
ESR2_HUMAN
-1.48
2.43
1.00
0.04
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
transmission distortion
GTEx eQTL
Esophagus_Muscularis
,
Lung
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)