rs1829629 chr6:154650629 A>G
- Sequence
ggctaatttcaatattgttatctc[A/G]gggaacagggaggtctgaggagag
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 3.56 | 0.23 | 2.00 | 0.20 | Weak Discordant |
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Motif analysis
