rs183620260 chr1:10210333 A>C
- Sequence
ttggccagcccgcacccctggttg[A/C]gccggcccgagggccaccaggggg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) KB (cervical adenocarcinoma)
- ASB for transcription factors
- CREB1_HUMAN CTBP1_HUMAN ZN217_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | -3.70 | 1.24 | 2.00 | n/a | No Hit | |||
| CTBP1_HUMAN | -1.66 | 2.71 | 2.00 | n/a | n/a | |||
| ZN217_HUMAN | -2.06 | 2.84 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood