rs1846 chr4:118981925 G>A
- Sequence
ggtctggacggaaacccagtttgc[G/A]ttcagaggaaaatagttgactatt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Jurkat (T-cells) primary foreskin fibroblasts Loucy (adult T acute lymphoblastic leukemia)
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.81 | 0.21 | 1.31 | |||
| Jurkat (T-cells) | 2.11 | -0.70 | 1.00 | |||
| primary foreskin fibroblasts | 2.06 | n/a | 1.00 | |||
| Loucy (adult T acute lymphoblastic leukemia) | 2.38 | n/a | 1.00 |
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