rs1850961 chr3:191355709 G>T
- Sequence
cctgggcttcaagatattagaatc[G/T]gttgagaatatgaaaagctgatga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- EP300_HUMAN ZNF24_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 2.33 | -1.93 | 1.00 | n/a | n/a | |||
| ZNF24_HUMAN | -2.11 | 2.60 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Whole_Blood