rs1860655 chr19:46232158 G>A
- Sequence
cccaggcacgcgtcccctgggatc[G/A]tggaaaacccactgggcaggtcca
- ASB in cell types
- SUM149PT (Inflammatory breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| SUM149PT (Inflammatory breast carcinoma) | -2.16 | 1.57 | 1.50 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis