rs1865249 chr8:141205883 A>C
- Sequence
gctcccactgcttcaggcctgtcc[A/C]ggggcggggagcgtctctgtggcc
- ASB in cell types
- foreskin keratinocyte spleen SEM (childhood B acute lymphoblastic leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | -0.22 | 1.86 | 2.00 | |||
| spleen | 2.27 | n/a | 1.00 | |||
| SEM (childhood B acute lymphoblastic leukemia) | 1.73 | -3.95 | 1.25 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid, Whole_Blood