rs1865492 chr16:75647705 G>A
- Sequence
ttaatttccaggtcaaggtgcgaa[G/A]ccccacctcttccgggggagaggg
- ASB in cell types
- primary B-CLL cells CD14+ monocytes
- ASB for transcription factors
- BRD4_HUMAN STAT1_HUMAN GABPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.67 | n/a | 3.00 | n/a | n/a | |||
| STAT1_HUMAN | 3.28 | n/a | 3.00 | n/a | No Hit | |||
| GABPA_HUMAN | 1.84 | -1.51 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood