rs1868600 chr2:174335399 A>C

Sequence
cgtgatttataccccatcccccgc[A/C]ttgctttggggattttgttgcaat
ASB in cell types
Hs68 (Canavan disease) K562 (myelogenous leukemia)
ASB for transcription factors
PCGF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PCGF2_HUMAN -0.90 1.53 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Sigmoid Muscle_Skeletal Nerve_Tibial Prostate Thyroid

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