rs186960061 chr11:519012 G>C

Sequence
acgagggcgcgcgaggcgccgcac[G/C]ggggaggcttctccgaaagccgcg
ASB in cell types
CD14+ monocytes HEK293T (embryonic kidney) HEK293 (embryonic kidney)
ASB for transcription factors
STAT1_HUMAN ZN394_HUMAN ZN510_HUMAN PRDM9_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 3.02 -5.02 2.6·10-51.00 2.00 n/a No Hit
ZN394_HUMAN -2.48 2.73 1.007.6·10-3 1.00 n/a No Hit
ZN510_HUMAN -1.74 1.74 1.000.01 1.00 n/a n/a
PRDM9_HUMAN 2.51 -4.75 0.051.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Heart_Atrial_Appendage Muscle_Skeletal Thyroid

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