rs187116 chr11:35144253 G>A

Sequence
gagtaactgcaattgtgcttcccc[G/A]gcaccttcgctttaggtcactcca
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) EOL-1 (Acute myeloid leukemia)
ASB for transcription factors
SPI1_HUMAN ETS1_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.06 1.24 1.008.5·10-7 1.31 n/a No Hit
ETS1_HUMAN -0.79 1.83 1.000.02 1.00 n/a No Hit
SMRC1_HUMAN 2.41 -2.01 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose hypertension (early onset hypertension) iga nephropathy spine bone mineral density (bmd)
GTEx eQTL Cells_Cultured_fibroblasts

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