rs1873186 chr8:126824866 G>T
- Sequence
caattaaagccgagtttttagacc[G/T]ttatctccttcctcctgggtgtgt
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- PKNX1_HUMAN STAG1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 2.07 | 0.39 | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 1.06 | 0.04 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | -0.72 | 2.30 | 2.00 | n/a | No Hit |
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