rs1875247 chr16:85010601 T>C

Sequence
cagtaaaagaagctacaaggcagg[T/C]agccgcatcaacactgtctcttac
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.33 -0.90 4.6·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP anti-tnf treatment response in rheumatoid arthritis (by das-28 score change at 3 months),  college completion,  hip bone mineral density (bmd),  prop taste detection threshold,  total cholesterol,  type 2 diabetes,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Whole_Blood

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