rs187892 chr3:37546956 A>G
- Sequence
cacaggccttttgtgagatcaaat[A/G]cctatgcatgacaggcaaataagc
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) LNCaP (prostate carcinoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.39 | 1.97 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.65 | 1.28 | 1.13 | n/a | No Hit |
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