rs1886422 chr1:109089398 G>A
- Sequence
caagcaggctgcagccagcagatg[G/A]cactgcagcagaaaggggcagagt
- ASB in cell types
- WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.57 | -0.01 | 2.75 | -4.74 | Concordant | |||
| STAG1_HUMAN | 1.94 | n/a | 1.00 | n/a | n/a |
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Motif analysis
