rs1887872 chr9:7186222 C>T
- Sequence
tttgctctgtttcttccccaatgt[C/T]acttcacaaatgtcagctttctca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 2.63 | -2.67 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.70 | -0.42 | 1.00 |
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