rs188884428 chr1:28785428 A>C
- Sequence
aagaagaggcacagcggccgggcg[A/C]ggtggctcacgcctgtaatcccag
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.23 | -0.86 | 1.00 | -3.45 | Concordant | |||
| STAG1_HUMAN | 1.45 | 0.27 | 1.00 | n/a | n/a |
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Motif analysis
