rs1890131 chr1:167628236 C>T
- Sequence
gcagctgcaagtcaccttgggtga[C/T]tgatgttatctaggcctaacggtt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia) MV-4-11 (Childhood acute monocytic leukemia)
- ASB for transcription factors
- SMRC1_HUMAN GMEB1_HUMAN EMSY_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | -2.52 | 2.84 | 1.00 | n/a | n/a | |||
| GMEB1_HUMAN | 2.24 | n/a | 3.00 | n/a | n/a | |||
| EMSY_HUMAN | 1.73 | n/a | 3.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.14 | 0.24 | 2.08 | n/a | No Hit | |||
| MECOM_HUMAN | 0.07 | 1.30 | 1.00 | n/a | n/a |
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