rs1906201 chr2:62579238 C>T
- Sequence
ggtggagcatacctgtaatttcag[C/T]tacttgggaggctgagtcatgaga
- ASB in cell types
- MCF10A (breast epithelial cells) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- P63_HUMAN MAFK_HUMAN TCF21_HUMAN NCOA3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P63_HUMAN | n/a | 3.51 | 1.50 | n/a | No Hit | |||
| MAFK_HUMAN | -2.07 | 2.34 | 1.00 | n/a | No Hit | |||
| TCF21_HUMAN | n/a | 1.55 | 3.00 | n/a | n/a | |||
| NCOA3_HUMAN | -2.25 | 2.63 | 1.00 | n/a | n/a | |||
| JUN_HUMAN | 0.93 | 0.06 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial