ADASTRA v5.1.3
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rs191649
chr18:35498082
A
>
G
Sequence
gatgtcagcgggcgttgtcctgcc[A/G]ctcgggcgctctgggcgtgggcct
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
BHE40_HUMAN
HDAC1_HUMAN
MNT_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN
-4.45
2.66
1.00
2.1·10
-3
1.50
n/a
No Hit
HDAC1_HUMAN
0.28
2.69
1.00
6.3·10
-3
2.38
n/a
n/a
MNT_HUMAN
-0.10
1.37
1.00
0.01
2.10
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
advanced age-related macular degeneration (geographic atrophy)
,
alzheimers disease
GTEx eQTL
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)