rs192294003 chr5:154190089 C>A
- Sequence
cgttcacacctaacgccagggccc[C/A]cctagaggaagaaaaccagggccc
- ASB in cell types
- GBM39 (Human brain tumor) spleen Peyer's patch
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.98 | 1.29 | 1.13 | -0.37 | Weak Concordant |
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Motif analysis
