rs1925715 chr1:228515743 G>A
- Sequence
tccttatgtccatgcgtgcccaac[G/A]tttagttcccacttataagtgaga
- ASB in cell types
- LNCaP (prostate carcinoma) GM02630 (Fanconi anemi)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.76 | -0.67 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.19 | 0.24 | 1.23 | n/a | No Hit |
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