ADASTRA v5.1.3
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Bill Cipher
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adastra.autosome.org
rs1925926
chrX:70433811
G
>
T
Sequence
ggacacgaccttgaggggccatca[G/T]ggggagatgggaggaggtgggttg
ASB in cell types
HEK293 (embryonic kidney)
GM18526 (B – cells Lymphoblastoid Cell Lines)
GM18951 (B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
ZBT26_HUMAN
PRDM2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT26_HUMAN
n/a
4.15
1.00
4.0·10
-10
2.00
n/a
n/a
PRDM2_HUMAN
n/a
3.74
1.00
1.2·10
-5
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
amyotrophic lateral sclerosis (als)
,
primary rhegmatogenous retinal detachment
GTEx eQTL
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)