rs193346 chr5:119427804 G>A

Sequence
ggcaattttcctaactctgcttct[G/A]caagagtttccttatcacttaccc
ASB in cell types
CD14+ monocytes MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
ASB for transcription factors
STAT1_HUMAN CEBPA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.27 -0.31 1.6·10-31.00 2.00 n/a No Hit
CEBPA_HUMAN 2.36 -0.79 6.9·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Liver,  Nerve_Tibial,  Prostate,  Spleen,  Stomach,  Thyroid

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