ADASTRA v5.1.3
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rs193755
chr16:11233471
G
>
T
Sequence
aggtcaccggcaaccccgggagcg[G/T]tggggcaggggctgctccgccagc
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
adult erythroblasts
ASB for transcription factors
NRF1_HUMAN
IKZF1_HUMAN
RBBP5_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN
-3.21
1.93
1.00
1.8·10
-4
1.50
n/a
No Hit
IKZF1_HUMAN
2.53
0.16
4.5·10
-3
1.00
1.50
n/a
No Hit
RBBP5_HUMAN
2.38
n/a
0.04
1.00
3.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Breast_Mammary_Tissue
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)