rs1945285 chr12:52264590 A>G
- Sequence
tcccacaatacttatggacagaaa[A/G]cagaaagtgacacatggaaaacag
- ASB in cell types
- GEN2.2 (blastic plasmacytoid dendritic cell neoplasm)
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GEN2.2 (blastic plasmacytoid dendritic cell neoplasm) | 2.57 | n/a | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid