ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs194652
chr1:32953605
C
>
T
Sequence
ttttcagaaagaacaaagtgagaa[C/T]aggtcagtctatgaatgcaaatga
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
TTC-1240 (Rhabdoid tumor of the kidney)
1.36
-0.76
0.03
1.00
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
asthma
,
bipolar disorder
,
birth weight
,
hdl cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Colon_Transverse
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Thyroid
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale