rs195191 chr1:115194763 G>A
- Sequence
tcctacagaaccagattgtggaaa[G/A]ccagctgagccagtcttgtgcctc
- ASB in cell types
- MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- GRHL2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GRHL2_HUMAN | n/a | 2.59 | 2.00 | 2.54 | Concordant | |||
| FOXA1_HUMAN | -0.53 | 3.18 | 2.00 | n/a | No Hit |
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Motif analysis
