rs1954718 chr8:107151587 A>C
- Sequence
tagaacttttctgtctatgtacac[A/C]cagttcaagatataattttccttt
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.69 | -0.75 | 1.83 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.51 | -0.42 | 1.60 | -4.83 | Concordant |
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Motif analysis
