rs1958367 chr14:32201874 A>G

Sequence
acctgacagatcggtcgcggccag[A/G]tacggcctggcggtcagagcacca
ASB in cell types
HepG2 (hepatoblastoma) HEK293 (embryonic kidney) primary B-CLL cells
ASB for transcription factors
TEAD3_HUMAN ARI4B_HUMAN NFAC3_HUMAN HMGX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TEAD3_HUMAN 3.25 n/a 2.5·10-31.00 2.00 n/a n/a
ARI4B_HUMAN 3.08 -5.59 0.011.00 2.00 n/a n/a
NFAC3_HUMAN 1.85 -1.66 0.011.00 1.00 n/a No Hit
HMGX4_HUMAN 2.98 -5.32 0.021.00 2.00 n/a n/a
GABP1_HUMAN 2.58 -1.59 0.041.00 2.00 n/a n/a
Items per page:
1 – 5 of 5

Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

Download