rs196603 chr7:36291502 C>T

Sequence
cgtggctgttaagtgcggtgctat[C/T]gaggaagtggtcagcacagtgcca
ASB in cell types
neutrophils from periferal blood GSC23 (Glioblastoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.98 0.52 9.2·10-31.00 1.65 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome waist hip ratio
GTEx eQTL Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic

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