rs197131 chr6:7991692 G>A
- Sequence
tgcccctgtgtgtggccaccagat[G/A]gacctgggatcactgactgtgttg
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.23 | -0.66 | 1.19 | -4.87 | Concordant | |||
| STAG1_HUMAN | 1.05 | -0.36 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
