rs1980503 chr6:133973338 G>A

Sequence
ggtaattttgtggttagaacctta[G/A]ggcccattcccctgtatcctcagc
ASB in cell types
bipolar neuron IPSC-derived bipolar neuron
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
bipolar neuron 2.16 -1.95 2.2·10-41.00 1.00
IPSC-derived bipolar neuron 2.29 -0.89 1.6·10-31.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  ldl cholesterol,  ldl cholesterol change with statins,  total cholesterol,  total cholesterol change with statins,  urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Tibial,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Skin_Sun_Exposed_Lower_leg

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