rs1984069 chr1:3419636 C>T
- Sequence
agaggccattggggataaagagtg[C/T]ttcacacggcttaagttgacagca
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- PRDM4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRDM4_HUMAN | n/a | 3.18 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), ldl cholesterol, stabilized warfarin dose, total cholesterol, total cholesterol change with statins, triglycerides change with statins